I am trying to calculate a fog frequency map based on a number of geoTIFFs that I have read as Xarray DataArrays using the rioxarray.open_rasterio function in Python 3.10. Each “pixel” can have one of the following values: 1 = fog, 0 = no fog, -9999 = no data. The end goal is to calculate a new Da…
Tag: python
‘setup.py install is deprecated’ warning shows up every time I open a terminal in VSCode
Every time I boot up terminal on VSCode, I get the following prompt. This does not happen on Terminal.app. How do I resolve this? Answer Install the setuptools 58.2.0 version using the following command
Calculate RMS, Count, SUM to array inside all columns of pandas dataframe
I would like to calculate RMS, Count, SUM to array inside all columns of pandas dataframe and then fulfill outputs into new three dataframes as shown below P.S > solution should deal with N numbers of columns, in my case, I have around 300 columns x,y,z,a,b,c ……. etc …… N ID x y z ……
Transforming an inconsistently formated Date Column into a consistently formatted Datetime column [duplicate]
This question already has answers here: How to change the datetime format in Pandas (8 answers) Closed 23 days ago. I have a Python DataFrame with a datetime column that has inconsistent format, and would like it to be all one format. The DataFarme contains 199622 rows, so this is not an exhaustive sample: Ex…
How to make a calculator function that uses the operator as an input?
I started learning Python yesterday; this is the first calculator I’ve made. I noticed that the last lines of code that print the equation’s result are repeated. Can I write a function that takes the operator as input and then prints the result with just one line of code? I imagine it would be som…
pandas: combine size and sum in a single groupby?
I have a dataframe of houses, one row per house, that looks like this: And I want to end up with a table that looks like this: Currently I’m doing two separate groupby calls, and then joining them together: Is there a way I could do this with a single groupby? Answer Output:
Wrong snakemake glob_wilcards and wildcard_constraints
Within my snakemake pipeline I’m trying to retrieve the correct wildcards. I’ve looked into wildcard_constraints and this post and this post, however I can’t figure out the exact solution. Here’s an example of file names within 2 datasets. 1 dataset contains paired mouse RNAseq read fi…
Python – How do you display base64 images during a for loop in Jupyter Notebook?
I’m trying to display a list of dicts where one of the keys is to a base64 string. So far, I have been unable to display the base64 strings as images during a for loop and not within a DataFrame. My code: Unfortunately, while this works on a single code cell running a single base64 string, it does not s…
Pandas – Combine multiple group rows into one row
I have been banging my head against a wall for a while now trying to figure out this seemingly easy data manipulation task in Pandas, however I have had no success figuring out how to do it or googling a sufficient answer :( All I want to do is take the table on the left of the snip below (will
x-ref the python standard library with intersphinx while omitting the module name
EDIT: Other answers than the one I provided are welcome! Consider the following function: When documenting with sphinx, I would like to cross-ref both str and Path with intersphinx. But obviously, it does not work for the latter since it is referenced as pathlib.Path in the objects.inv file. Is there a way to…