I installed the anaconda distribution (version 2022.05) on a windows 10 (64 bit) machine. During installation I followed the recommendations given here (installed it only for myself and didn’t add anaconda to the PATH variable). I didn’t change any setting, so you can assume a virgin anaconda with…
Tag: environment
Snakemake – How to set conda environment path
In Snakemake, conda environments can be easily set up by defining rules as such conda: “envs/my_environment.yaml”. This way, YAML files specify which packages to install prior to running the pipeline. Some software requires a path to third-party-software, to execute specific commands. An example o…
Visual Studio Code terminal doesn’t activate Conda environment
I read this Stack Overflow post on a similar issue, but the suggestions there don’t seem to be working. I installed Visual Studio Code on my Windows machine and added the Python extension. Then I changed the Python path for my project to C:Usersusername.condaenvstompython.exe. The .vscode/settings.json …
python conda: created a environment, but it is not using conda’s python
I have been using anaconda for a while, and its Python executable is located at /Users/ufo/opt/anaconda3/bin/python. I have tried to create an environment with conda, and the new environment would use copy this Python to environment’s bin. However, with current Anaconda versation, the new environment wi…