My hashtag co-occurrence network is stored as an adjacency matrix in CSV format like this. Then I use this page as a reference Plot NetworkX Graph from Adjacency Matrix in CSV file I want to import this matrix into networkx and I tried this: But I only got this: How can I import my data correctly, I want to u…
Tag: networkx
Error for max(nx.connected_component_subgraphs(),) no attribute ‘connected_component_subgraphs’
I am trying to run this code: But I am getting this error message: How do I get around that? Answer connected_component_subgraphs() has been removed from version 2.4. Instead, use this: according to this answer.
How to connect two nodes if they are disconnected
I use a python NetworkX graph. How to check if 2 nodes are disconnected and then get a new version of the graph where these 2 nodes are connected. The difference between 2 graphs should have min edit distance (Levenshtein distance) Before and after for nodes=[1,2]: | Answer you can also have a condition to ch…
module ‘networkx’ has no attribute ‘from_pandas_edgelist’
here is my code: and there is an error:AttributeError: module ‘networkx’ has no attribute ‘from_pandas_edgelist’* however, this the documents of networx we could find networkx has the attribute. here is the link of the documents:from_pandas_edgelist why did this question happen? Answer…
How to update a NetworkX plot in real-time?
I’m trying to update a networkx plot using matplotlib in a canvas, but it adds a new plot to the graph each time instead of updating the graph below, I had to add the call to nx.draw_networkx() function to get it to update and I’m not sure if this is part of the issue. Example Code: Answer I have …
Python NetworkX — set node color automatically based on a list of values
I generated a graph with networkx Now I would like to assign a value to each node between 0 and 4 And I would like to assign the color to each node base on the val list and plot something like shown here Answer To set a node property, you can use: Networkx draw calls down to draw_networkx_nodes, this takes
Networkx: Creating a complete graph for a given set of nodes
I have a list as c4_leaves = [56,78,90,112]. I’m trying to create a complete graph using these elements in c4_leaves as nodes. Here’s what I’ve tried: And then the minimum spanning tree of the above graph as: When I draw G_ex, it gives me the correct graph, but when I print details of the mi…
Removing self-loops from undirected networkx graph
I have created a graph from list of nodes using networkx. It has self loops. How to remove them? Following is sample: I don’t want (1, 1) edges. Answer (instructions for networkx 1.x below) If you’re using networkx 2.x try If you have a MultiGraph (which for example configuration_model produces), …
find number of connected edges to a node and node with max connected edges
In a graph, how do I find the number of connected (directly bound) edges to a node? And then, it would be trivial, but if there is any direct method to find the unique(s) node(s) with the maximum edges connected to them it would be nice. I’m using Python 2.7 and Networkx. Until now, I’m doing like…
calculate indegree centralization of graph with python networkx
I have a graph and want to calculate its indegree and outdegree centralization. I tried to do this by using python networkx, but there I can only find a method to calculate indegree and outdegree centrality for each node. Is there a way to calculate in- and outdegree centralization of a graph in networkx? Ans…