I really struggle with tidying up the table into a “normal” dataframe again after having aggregated something. I had a table like that (columns):
RnnSize EmbSize RnnLayer Epochs Alpha Eval Run Result
So I calculated average and std of the Result column over multiple runs using that command:
df.groupby(["RnnSize", "EmbSize", "RnnLayer", "Epochs", "Alpha", "Eval"]).agg({'Result': ['mean', 'std']})
The output is a DataFrame like that:
Result mean std RnnSize EmbSize RnnLayer Epochs Alpha Eval
It looks a bit like three levels.
df.columns outputs the following multiindex:
MultiIndex([( 'index', ''), ( 'RnnSize', ''), ( 'EmbSize', ''), ('RnnLayer', ''), ( 'Epochs', ''), ( 'Alpha', ''), ( 'Eval', ''), ( 'Result', 'std'), ( 'Result', 'std')], )
How do I flatten that again, removing “Result” and putting mean and std into the same “level” as the rest? There are so many commands like reset_index, drop_level and so on, but I did not find out yet how to fix that. It quite confuses me.
Edit: For reproducability, here is my entire code:
import numpy as np import pandas as pd import matplotlib.pyplot as plt dfRuns = pd.read_csv("Results.csv", encoding="utf-8") dfRuns dfAv = dfRuns.copy() dfAv = dfAv.groupby(["RnnSize", "EmbSize", "RnnLayer", "Epochs", "Alpha", "Eval"]).agg({'Result': ['mean', 'std']})
And the (shortened) csv file Results.csv:
RnnSize,EmbSize,RnnLayer,Epochs,Alpha,Eval,Run,Result 128,200,2,150,0.1,Precision,1,0.5940 128,200,2,150,0.1,Recall,1,0.5038 128,200,2,150,0.1,F1,1,0.5144 128,200,2,150,0.1,Precision,2,0.5851 128,200,2,150,0.1,Recall,2,0.4995 128,200,2,150,0.1,F1,2,0.5082
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Answer
Use reset_index()
and then flatten the indexes:
df = df.reset_index() df.columns = [' '.join(col).rstrip() for col in df.columns.to_numpy()]